[Haskell-cafe] Thanks for the help: image of draft visualization
Don Stewart
dons at galois.com
Fri Mar 7 17:30:07 EST 2008
jefferson.r.heard:
> Thanks for everyone's help on the list re my Haskell woes with the latest
> visualization effort. I've been making my code more generic for the last
> week, and I plan on releasing a visualization framework back to the
> community at some point. Gotta get approval from my boss before releasing
> code back to the wild, but here's an image of the draft of the
> visualization I've been working on:
>
> [1]http://vizdata.renci.org/projects/jeff/ProteinViz/ProteinViz.png
>
> Basically, what you're seeing is 18,500 genes arranged in a full
> heirarchical clustering (the clustering technique uses a metric I'm
> unfamiliar with, and I got the dataset pre-packaged from the guy who's
> using it). The final visualization is fully interactive and runs fine
> under Linux, dies a miserable death under windows (runs out of RAM, and I
> can't figure out why, nor do I particularly care), and primarily runs on
> our 14 foot by 9 foot (4.5x3 metres for those of us in metric) linux
> display wall. The full program is about 800 linux of Haskell code using
> nothing but the standard library under GHC 6.8.
>
> Again, thanks for all your help!
>
Truly awesome. Well done!
Can't wait to see a writeup on your approach, and lessons learnt.
-- Don
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